業績
英語論文
"De Novo Discovery of Pseudo-Natural Prenylated Macrocyclic Peptide Ligands" S. Inoue; D. Thanh Nguyen; K. Hamada; R. Okuma; C. Okada; M. Okada; I. Abe; T. Sengoku; Y. Goto; H. Suga
Angew. Chem. Int. Ed. Engl. "Oxidation-guided and collision-induced linearization assists de novo sequencing of thioether macrocyclic peptides" A. Hayashi; Y. Goto; Y. Saito; H. Suga; J. Morimoto; S. Sando
Chem. Commun. "A Compact Reprogrammed Genetic Code for De Novo Discovery of Proteolytically Stable Thiopeptides" A.A. Vinogradov; Y. Zhang; K. Hamada; S. Kobayashi; K. Ogata; T. Sengoku; Y. Goto; H. Suga
J. Am. Chem. Soc. "Modulating the Acceptor Preference of His-C-Geranyltransferase LimF" Y.C. Zhang; Y. Goto; H. Suga
Isr. J. Chem. "Switching Prenyl Donor Specificities of Cyanobactin Prenyltransferases" Y. Zhang; K. Hamada; M. Satake; T. Sengoku; Y. Goto; H. Suga
J. Am. Chem. Soc. "Deep Learning-Driven Library Design for the De Novo Discovery of Bioactive Thiopeptides" J.S. Chang; A.A. Vinogradov; Y. Zhang; Y. Goto; H. Suga
ACS Cent. Sci. "Discovery, biochemical characterization, and bioengineering of cyanobactin prenyltransferases" Y. Zhang; Y. Goto; H. Suga
Trends Biochem. Sci. "Label-free quantification of passive membrane permeability of cyclic peptides across lipid bilayers: penetration speed of cyclosporin A across lipid bilayers" T. Ono; K.V. Tabata; Y. Goto; Y. Saito; H. Suga; H. Noji; J. Morimoto; S. Sando
Chem. Sci. "Structural basis of tRNAPro acceptor stem recognition by a bacterial trans-editing domain" X. Ma; M. Bakhtina; I. Shulgina; W.A. Cantara; A.B. Kuzmishin Nagy; Y. Goto; H. Suga; M.P. Foster; K. Musier-Forsyth
Nucleic Acids Res. "Ribosomal Synthesis of Peptides Bearing Noncanonical Backbone Structures via Chemical Posttranslational Modifications" Y. Goto; H. Suga
Methods Mol. Biol. "Reactivity and mechanism in chemical and synthetic biology" N.G.J. Richards; S.L. Bearne; Y. Goto; E.J. Parker
Phil. Trans. B "LimF is a versatile prenyltransferase for histidine-C-geranylation on diverse non-natural substrates" Y.C. Zhang; K. Hamada; D.T. Nguyen; S. Inoue; M. Satake; S. Kobayashi; C. Okada; K. Ogata; M. Okada; T. Sengoku; Y. Goto; H. Suga
Nat. Catal. "Post-translational backbone-acyl shift yields natural product-like peptides bearing hydroxyhydrocarbon units" T. Kuroda; Y. Huang; S. Nishio; Y. Goto; H. Suga
Nat. Chem. "De novo discovery of thiopeptide pseudo-natural products acting as potent and selective TNIK kinase inhibitors" A.A. Vinogradov; Y. Zhang; K. Hamada; J.S. Chang; C. Okada; H. Nishimura; N. Terasaka; Y. Goto; K. Ogata; T. Sengoku; H. Onaka; H. Suga
J. Am. Chem. Soc. "Accurate models of substrate preferences of post-translational modification enzymes from a combination of mRNA display and deep learning" A.A. Vinogradov; J.S. Chang; H. Onaka; Y. Goto; H. Suga
ACS Cent. Sci. "Solid-phase-based synthesis of lactazole-like thiopeptides" Y. Zhang; A.A. Vinogradov; J.S. Chang; Y. Goto; H. Suga
Org. Lett. "In vitro selection of thioether-closed macrocyclic peptide ligands by means of the RaPID system" T. Katoh; Y. Goto; H. Suga
Methods Mol. Biol. "Posttranslational chemical installation of azoles into translated peptides" H. Tsutsumi; T. Kuroda; H. Kimura; Y. Goto; H. Suga
Nat. Commun. "New developments in RiPP discovery, enzymology and engineering" M. Montalban-Lopez; T.A. Scott; S. Ramesh; I.R. Rahman; A.J. van Heel; J.H. Viel; V. Bandarian; E. Dittmann; O. Genilloud; Y. Goto; M.J. Grande Burgos; C. Hill; S. Kim; J. Koehnke; J.A. Latham; A.J. Link; B. Martinez; S.K. Nair; Y. Nicolet; S. Rebuffat; H.G. Sahl; D. Sareen; E.W. Schmidt; L. Schmitt; K. Severinov; R.D. Sussmuth; A.W. Truman; H. Wang; J.K. Weng, et al.
Nat. Prod. Rep. "The RaPID platform for the discovery of pseudo-natural macrocyclic peptides" Y. Goto; H. Suga
Acc. Chem. Res. "Site-specific nonenzymatic peptide S/O-glutamylation reveals the extent of substrate promiscuity in glutamate elimination domains" A.A. Vinogradov; M. Nagano; Y. Goto; H. Suga
J. Am. Chem. Soc. "Discovery and development of cyclic peptide inhibitors of CIB1" V.A. Haberman; S.R. Fleming; T.M. Leisner; A.C. Puhl; E. Feng; L. Xie; X. Chen; Y. Goto; H. Suga; L.V. Parise; D. Kireev; K.H. Pearce; A.A. Bowers
ACS Med. Chem. Lett. "Mid-sized macrocyclic peptides as a new drug modality"
Y. Goto; N. M.; H. Suga
In Middle Molecular Strategy (Springer), pp. 97-107 (2021)
"Development of flexizyme aminoacylation ribozymes, and their applications"
T. Katoh; Y. Goto; T. Passioura; H. Suga
In Ribozymes: Principles, Methods, Applications, S. Müller, B. Masquida, and W. Winkler, eds. (Wiley), pp. 519-543 (2021)
"Promiscuous enzymes cooperate at the substrate level en route to lactazole A" A.A. Vinogradov; M. Shimomura; N. Kano; Y. Goto; H. Onaka; H. Suga
J. Am. Chem. Soc. "Minimal lactazole scaffold for in vitro thiopeptide bioengineering" A.A. Vinogradov; M. Shimomura; Y. Goto; T. Ozaki; S. Asamizu; Y. Sugai; H. Suga; H. Onaka
Nat. Commun. "Accurate broadcasting of substrate fitness for lactazole biosynthetic pathway from reactivity-profiling mRNA display" A.A. Vinogradov; E. Nagai; J.S. Chang; K. Narumi; H. Onaka; Y. Goto; H. Suga
J. Am. Chem. Soc. "Human trans-editing enzyme displays tRNA acceptor-stem specificity and relaxed amino acid selectivity" O. Vargas-Rodriguez; M. Bakhtina; D. McGowan; J. Abid; Y. Goto; H. Suga; K. Musier-Forsyth
J. Biol. Chem. "Improved stability of siRNA-loaded lipid nanoparticles prepared with a PEG-monoacyl fatty acid facilitates ligand-mediated siRNA delivery" Y. Sakurai; W. Mizumura; K. Ito; K. Iwasaki; T. Katoh; Y. Goto; H. Suga; H. Harashima
Mol. Pharm. "A macrocyclic peptide library with a structurally constrained cyclopropane-containing building block leads to thiol-independent inhibitors of phosphoglycerate mutase" R. Okuma; T. Kuwahara; T. Yoshikane; M. Watanabe; P. Dranchak; J. Inglese; S. Shuto; Y. Goto; H. Suga
Chem. Asian J. "Chemoenzymatic posttranslational modification reactions for the synthesis of psi[CH2NH]-containing peptides" Y. Kato; T. Kuroda; Y. Huang; R. Ohta; Y. Goto; H. Suga
Angew. Chem. Int. Ed. Engl. "In vitro biosynthesis of peptides containing exotic azoline analogues" Y. Goto; H. Suga
ChemBioChem "Exploring the post-translational enzymology of PaaA by mRNA display" S.R. Fleming; P.M. Himes; S.V. Ghodge; Y. Goto; H. Suga; A.A. Bowers
J. Am. Chem. Soc. "Generation of non-standard macrocyclic peptides specifically binding TSC-22 homologous gene-1" S.T.P. Tran; C.J. Hipolito; H. Suzuki; R. Xie; H.D. Kim Tuyen; P.T. Dijke; N. Terasaka; Y. Goto; H. Suga; M. Kato
Biochem. Biophys. Res. Commun. "Ribosomal synthesis of backbone-cyclic peptides compatible with in vitro display" R. Takatsuji; K. Shinbara; T. Katoh; Y. Goto; T. Passioura; R. Yajima; Y. Komatsu; H. Suga
J. Am. Chem. Soc. "Ribosomal formation of thioamide bonds in polypeptide synthesis" R. Maini; H. Kimura; R. Takatsuji; T. Katoh; Y. Goto; H. Suga
J. Am. Chem. Soc. "Meeting peptides in Kyoto" S. Futaki; K. Matsuzaki; Y. Goto
ChemBioChem "Flexizyme-enabled benchtop biosynthesis of thiopeptides" S.R. Fleming; T.E. Bartges; A.A. Vinogradov; C.L. Kirkpatrick; Y. Goto; H. Suga; L.M. Hicks; A.A. Bowers
J. Am. Chem. Soc. "Non-competitive cyclic peptides for targeting enzyme-substrate complexes" T.E. McAllister; T.L. Yeh; M.I. Abboud; I.K.H. Leung; E.S. Hookway; O.N.F. King; B. Bhushan; S.T. Williams; R.J. Hopkinson; M. Munzel; N.D. Loik; R. Chowdhury; U. Oppermann; T.D.W. Claridge; Y. Goto; H. Suga; C.J. Schofield; A. Kawamura
Chem. Sci. "Artificial division of codon boxes for expansion of the amino acid repertoire of ribosomal polypeptide synthesis" Y. Iwane; T. Katoh; Y. Goto; H. Suga
Methods Mol. Biol. "Engineering of RiPP pathways for the production of artificial peptides bearing various non-proteinogenic structures" Y. Goto; H. Suga
Curr. Opin. Chem. Biol. "Artificial in vitro biosynthesis systems for the development of pseudo-natural products" Y. Goto; H. Suga
Bull. Chem. Soc. Jpn. "Quality control by trans-editing factor prevents global mistranslation of non-protein amino acid alpha-aminobutyrate" J.M. Bacusmo; A.B. Kuzmishin; W.A. Cantara; Y. Goto; H. Suga; K. Musier-Forsyth
RNA Biol. "Efficient siRNA Delivery by lipid nanoparticles modified with a nonstandard macrocyclic peptide for EpCAM-targeting" Y. Sakurai; W. Mizumura; M. Murata; T. Hada; S. Yamamoto; K. Ito; K. Iwasaki; T. Katoh; Y. Goto; A. Takagi; M. Kohara; H. Suga; H. Harashima
Mol. Pharm. "Dissection of goadsporin biosynthesis by in vitro reconstitution leading to designer analogues expressed in vivo" T. Ozaki; K. Yamashita; Y. Goto; M. Shimomura; S. Hayashi; S. Asamizu; Y. Sugai; H. Ikeda; H. Suga; H. Onaka
Nat. Commun. "Highly selective inhibition of histone demethylases by de novo macrocyclic peptides" A. Kawamura; M. Munzel; T. Kojima; C. Yapp; B. Bhushan; Y. Goto; A. Tumber; T. Katoh; O.N. King; T. Passioura; L.J. Walport; S.B. Hatch; S. Madden; S. Muller; P.E. Brennan; R. Chowdhury; R.J. Hopkinson; H. Suga; C.J. Schofield
Nat. Commun. "Conformational and chemical selection by a trans-acting editing domain" E.M. Danhart; M. Bakhtina; W.A. Cantara; A.B. Kuzmishin; X. Ma; B.L. Sanford; M. Kosutic; Y. Goto; H. Suga; K. Nakanishi; R. Micura; M.P. Foster; K. Musier-Forsyth
Proc. Natl. Acad. Sci. USA "Biological synthesis and affinity-based selection of small macrocyclic peptide ligands"
T. Passioura; T. Katoh; Y. Goto; H. Suga
In Cyclic Peptides: From Bioorganic Synthesis to Applications, J. Koehnke, J. Naismith, and W.A.v.d. Donk, eds. (RSC Publishing), pp. 225-254 (2017)
"Expanding the amino acid repertoire of ribosomal polypeptide synthesis via the artificial division of codon boxes" Y. Iwane; A. Hitomi; H. Murakami; T. Katoh; Y. Goto; H. Suga
Nat. Chem. Y. Goto; H. Suga
Chem. Lett. "Characterization of the stereochemical configuration of lanthionines formed by the lanthipeptide synthetase GeoM" N. Garg; Y. Goto; T. Chen; W.A. van der Donk
Biopolymers "Ribosomal synthesis of peptides with multiple beta-amino acids" T. Fujino; Y. Goto; H. Suga; H. Murakami
J. Am. Chem. Soc. "Recent developments of engineered translational machineries for the incorporation of non-canonical amino acids into polypeptides" N. Terasaka; Y. Iwane; A.S. Geiermann; Y. Goto; H. Suga
Int. J. Mol. Sci. "Ancestral AlaX editing enzymes for control of genetic code fidelity are not tRNA specific" E.M. Novoa; O. Vargas-Rodriguez; S. Lange; Y. Goto; H. Suga; K. Musier-Forsyth; L. Ribas de Pouplana
J. Biol. Chem. "Selection-based discovery of macrocyclic peptides for the next generation therapeutics" T. Morioka; N.D. Loik; C.J. Hipolito; Y. Goto; H. Suga
Curr. Opin. Chem. Biol. "Homologous trans-editing factors with broad tRNA specificity prevent mistranslation caused by serine/threonine misactivation" Z. Liu; O. Vargas-Rodriguez; Y. Goto; E.M. Novoa; L. Ribas de Pouplana; H. Suga; K. Musier-Forsyth
Proc. Natl. Acad. Sci. USA "A fluorescent imaging probe based on a macrocyclic scaffold that binds to cellular EpCAM" K. Iwasaki; Y. Goto; T. Katoh; T. Yamashita; S. Kaneko; H. Suga
J. Mol. Evol. "Structural basis for potent inhibition of SIRT2 deacetylase by a macrocyclic peptide inducing dynamic structural change" K. Yamagata; Y. Goto; H. Nishimasu; J. Morimoto; R. Ishitani; N. Dohmae; N. Takeda; R. Nagai; I. Komuro; H. Suga; O. Nureki
Structure "Selection-based discovery of druglike macrocyclic peptides" T. Passioura; T. Katoh; Y. Goto; H. Suga
Annu. Rev. Biochem. "One-pot synthesis of azoline-containing peptides in a cell-free translation system integrated with a posttranslational cyclodehydratase" Y. Goto; Y. Ito; Y. Kato; S. Tsunoda; H. Suga
Chem. Biol. "Investigating the role of a backbone to substrate hydrogen bond in OMP decarboxylase using a site-specific amide to ester substitution" B.J. Desai; Y. Goto; A. Cembran; A.A. Fedorov; S.C. Almo; J. Gao; H. Suga; J.A. Gerlt
Proc. Natl. Acad. Sci. USA "Distinct tRNA recognition strategies used by a homologous family of editing domains prevent mistranslation" M. Das; O. Vargas-Rodriguez; Y. Goto; H. Suga; K. Musier-Forsyth
Nucleic Acids Res. "In vitro synthetic biology of the genetic code: its development and applications"
H. Suga; C.J. Hipolito; Y. Goto; T. Katoh; N.K. Bashiruddin
In Synthetic Biology, M. Ryadnov, L. Brunsveld, and H. Suga, eds. (RSC Publishing), pp. 126-163 (2014)
"Nonstandard peptide expression under the genetic code consisting of reprogrammed dual sense codons" Y. Goto; M. Iseki; A. Hitomi; H. Murakami; H. Suga
ACS Chem. Biol. "Reevaluation of the D-amino acid compatibility with the elongation event in translation" T. Fujino; Y. Goto; H. Suga; H. Murakami
J. Am. Chem. Soc. "Charging of tRNAs using ribozymes and selection of cyclic peptides containing thioethers" P.C. Reid; Y. Goto; T. Katoh; H. Suga
Methods Mol. Biol. "Selective thioether macrocyclization of peptides having the N-terminal 2-chloroacetyl group and competing two or three cysteine residues in translation" K. Iwasaki; Y. Goto; T. Katoh; H. Suga
Org. Biomol. Chem. "Flexizymes as a tRNA acylation tool facilitating genetic code reprogramming" Y. Goto; H. Suga
Methods Mol. Biol. "Lantibiotics from Geobacillus thermodenitrificans" N. Garg; W. Tang; Y. Goto; S.K. Nair; W.A. van der Donk
Proc. Natl. Acad. Sci. USA "Natural product-like macrocyclic N-methyl-peptide inhibitors against a ubiquitin ligase uncovered from a ribosome-expressed de novo library" Y. Yamagishi; I. Shoji; S. Miyagawa; T. Kawakami; T. Katoh; Y. Goto; H. Suga
Chem. Biol. "Ribosomal synthesis of backbone-macrocyclic peptides containing gamma-amino acids" Y. Ohshiro; E. Nakajima; Y. Goto; S. Fuse; T. Takahashi; T. Doi; H. Suga
ChemBioChem "Ribosomal synthesis of backbone macrocyclic peptides" T. Katoh; Y. Goto; M.S. Reza; H. Suga
Chem. Commun. "Mechanistic studies of Ser/Thr dehydration catalyzed by a member of the LanL lanthionine synthetase family" Y. Goto; A. Okesli; W.A. van der Donk
Biochemistry "Preparation of materials for flexizyme reactions and genetic code reprogramming" Y. Goto; T. Katoh; H. Suga
Protoc. Exchange "Flexizymes for genetic code reprogramming" Y. Goto; T. Katoh; H. Suga
Nat. Protoc. "Ribosome evolution for two artificial amino acids in E. coli" G. Hayashi; Y. Goto; H. Suga
Chem. Biol. "Discovery of unique lanthionine synthetases reveals new mechanistic and evolutionary insights" Y. Goto; B. Li; J. Claesen; Y. Shi; M.J. Bibb; W.A. van der Donk
PLoS Biol. "Ribosomal synthesis of cyclic peptides with a fluorogenic oxidative coupling reaction" Y. Yamagishi; H. Ashigai; Y. Goto; H. Murakami; H. Suga
ChemBioChem "Ribosomal synthesis of peptides with C-terminal lactams, thiolactones, and alkylamides" E. Nakajima; Y. Goto; Y. Sako; H. Murakami; H. Suga
ChemBioChem "Translation initiation with initiator tRNA charged with exotic peptides" Y. Goto; H. Suga
J. Am. Chem. Soc. "Ribosomal synthesis of dehydrobutyrine- and methyllanthionine-containing peptides" Y. Goto; K. Iwasaki; K. Torikai; H. Murakami; H. Suga
Chem. Commun. "Ribosomal synthesis of peptidase-resistant peptides closed by a nonreducible inter-side-chain bond" Y. Sako; Y. Goto; H. Murakami; H. Suga
ACS Chem. Biol. "Ligand-stabilized hairpin structures interfere with elongation of human telomere" M. Hagihara; Y. Goto; K. Nakatani
ChemBioChem "Reprogramming the translation initiation for the synthesis of physiologically stable cyclic peptides" Y. Goto; A. Ohta; Y. Sako; Y. Yamagishi; H. Murakami; H. Suga
ACS Chem. Biol. "Initiating translation with D-amino acids" Y. Goto; H. Murakami; H. Suga
RNA "Analysis of mismatched DNA by mismatch binding ligand (MBL)-Sepharose affinity chromatography" Y. Goto; H. Suda; A. Kobori; K. Nakatani
Anal. Bioanal. Chem. "Small-molecule binding to the nonquadruplex form of the human telomeric sequence" Y. Goto; S. Hagihara; M. Hagihara; K. Nakatani
ChemBioChem "Evaluation of mismatch-binding ligands as inhibitors for Rev-RRE interaction" K. Nakatani; S. Horie; Y. Goto; A. Kobori; S. Hagihara
Bioorg. Med. Chem. "A new ligand binding to G-G mismatch having improved thermal and alkaline stability" T. Peng; T. Murase; Y. Goto; A. Kobori; K. Nakatani
Bioorg. Med. Chem. Lett. "Small-molecule ligand induces nucleotide flipping in (CAG)n trinucleotide repeats" K. Nakatani; S. Hagihara; Y. Goto; A. Kobori; M. Hagihara; G. Hayashi; M. Kyo; M. Nomura; M. Mishima; C. Kojima
Nat. Chem. Biol. "The binding of guanine-guanine mismatched DNA to naphthyridine dimer immobilized sensor surfaces: kinetic aspects" K. Nakatani; A. Kobori; H. Kumasawa; Y. Goto; I. Saito
Bioorg. Med. Chem. "Detection of guanine-adenine mismatches by surface plasmon resonance sensor carrying naphthyridine-azaquinolone hybrid on the surface" S. Hagihara; H. Kumasawa; Y. Goto; G. Hayashi; A. Kobori; I. Saito; K. Nakatani
Nucleic Acids Res.
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生命化学研究レター "アゾリン骨格含有ペプチドの試験管内生合成〜擬天然物の簡便・自在合成を目指して
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日本化学会バイオテクノロジー部会ニュースレター "APIPS2013にてExcellent Stone Awardを受賞して"
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